Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015791242.1_cds_XP_016506207.1_1874
CDS Infomation

[gene=LOC107823975] [db_xref=GeneID:107823975] [protein=neutral/alkaline invertase 3, chloroplastic-like isoform X2] [protein_id=XP_016506207.1] [location=join(69175..69855,70849..71014,71100..71311,72225..72718,72818..72866,74329..74655)] [gbkey=CDS]
Sequence

ATGGGGGCTTCAGAAGCAGCCCTTCACTTTTTATCCGGGGAGTTTTCCTGTCAATTCCGA
ACAAGTTCAATCTTGGCGAAGTCGAGCTCTCTACTTTGCTATGAGCATTGTTTAAAAAGT
AGAAATTTTGGGGACATGCGGTATCAGCAGATCAAGGGTTTAAGTAAGTGGAAAAAATGC
TCAAGTTTAAATGCTTTTCGCGGCATACATAGTGTTTTTGGCGGAGAAAAGCTTCGTAGT
CGCTCCAAATCATTGATCTGCAATTGCCAACAACCTGAAAGATTCAATGAGGCAATCATT
AAGAATGGAAATGGGAGGTCAATTCATGCAATCAGTTCAAAAATTCCAAATCATGCTCAA
GATGAACAGATGATTAAGCAGGAAAATGGAGCTCAGCTTTTCAGTAAAGGTTTGAAAACT
GCTGCCACGGTTAATAGTGCTTTTCCTAGGACCAACACGGACTCTATTGAAGATGAAGCG
TGGCATTTCTTGCGAGCAGCCATGGTTTATTACTGTGGCACCCCAGTTGGAACTATAGCT
GCTAATGATCCAAGTGAAGCAACTATGCTAAACTATGATCAAGTATTTATACGTGATTTT
ATACCTTCTGGGATAGCGTTCCTACTAAAAGGAGAATATGATATCGTGAGGAATTTCATA
CTTCACACACTTCAGTTGCAGAGTTGGGAGAAAACAATGGATTGCTATAGTCCAGGTCAA
GGACTGATGCCCGCCAGCTTCAAAGTGCGTACTGTTCCACTTGATAATGACGAATCTGCA
ACAGAAGATGTATTGGATCCAGACTTTGGTGAGGCAGCAATTGGTCGAGTTGCACCTGTT
GATTCAGGATTGTGGTGGATTATACTGCTACGAGCATATGGGAAATGCTCTGGAGATCTT
TCTCTTCAGGAGAGGGTTGATGTCCAAACTGGAATGAAGATGATCCTTAAGTTATGTCTT
GCAGATGGTTTTGATATGTTTCCAACTTTGTTGGTGACCGATGGTTCTTGCATGATAGAT
CGCCGTATGGGAATCCATGGCCACCCTCTGGAAATTCAGGCGTTATATTATTCAGCCTTA
CTTTGCGCACGAGAGATGCTTGCTCCAGAGGAGGTATCAACAGACCTTGTTAGGGCACTT
AACAATCGTCTGCTTGCATTGTCATTTCATATCAGGGAATACTACTGGATCGATGTGAAA
AAATTGAACGAGATTTATAGATACAAAACAGAGGAATATTCATATGATGCGATCAACAAG
TTCAATATATATCCAGATCAAATTCCTCCCTGGCTGGTGGAATGGATGCCTAGTAAAGGA
GGCTATCTTATTGGAAACTTGCAGCCAGCTCACATGGATTTCCGGTTCTTTGCACTTGGG
AACTTATGGTCCATTGTAAGCAGTCTTGCTACTATAGATCAGTCACATGCTATTTTAGAT
CTTATTGAAGCAAAATGGGAAGACTTAGTAGCTGATATGCCACTGAAGATATGTTATCCT
GCTCTTGAGGGCCAGGAATGGCGCATTATTACCGGCGGTGATCCAAAAAACACGCCTTGG
TCTTACCATAACGGAGGATCCTGGCCAACTTTGCTCTGGCAGTTGACTGTGGCATGCATA
AAAATGAAGAGGCCAGAAATAGCTGAAAAGGCAATTATGATTGCTGAGAGACGCTTAGCG
AGAGACAGGTGGCCGGAATACTATGATACAAGGCGAGGAGGGTTCATCGGAAAACAGGCA
CGTCTCTTTCAGACGTGGACTATTGCAGGATATCTAGTGGCAAAGCAACTTATTGCCAAT
CCAGAAGCTGCAAAGATTTTAATCAATGTGGAGGATACAGAACTTCTAAGTGCCTTTTCA
AGCATTCTGAGTTCAAACCCAAGGAGAAAACGTTCACGAAAAGGAGTTAAGCAGTCTTTC
ATCATATGA

Peptide Sequence

PEP ID

XP_016506207.1
PEP Infomation

PREDICTED: neutral/alkaline invertase 3, chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MGASEAALHFLSGEFSCQFRTSSILAKSSSLLCYEHCLKSRNFGDMRYQQIKGLSKWKKC
SSLNAFRGIHSVFGGEKLRSRSKSLICNCQQPERFNEAIIKNGNGRSIHAISSKIPNHAQ
DEQMIKQENGAQLFSKGLKTAATVNSAFPRTNTDSIEDEAWHFLRAAMVYYCGTPVGTIA
ANDPSEATMLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCYSPGQ
GLMPASFKVRTVPLDNDESATEDVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDL
SLQERVDVQTGMKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALYYSAL
LCAREMLAPEEVSTDLVRALNNRLLALSFHIREYYWIDVKKLNEIYRYKTEEYSYDAINK
FNIYPDQIPPWLVEWMPSKGGYLIGNLQPAHMDFRFFALGNLWSIVSSLATIDQSHAILD
LIEAKWEDLVADMPLKICYPALEGQEWRIITGGDPKNTPWSYHNGGSWPTLLWQLTVACI
KMKRPEIAEKAIMIAERRLARDRWPEYYDTRRGGFIGKQARLFQTWTIAGYLVAKQLIAN
PEAAKILINVEDTELLSAFSSILSSNPRRKRSRKGVKQSFII

Transcript Sequence

Gene sequence data has not been registered.